Published in 2024 in PLoS Biology, “Deep mutational scanning of H5 hemagglutinin to inform influenza virus surveillance” contributes to understanding influenza A virus mutations. With 58 citations to date and a citing landscape featuring prominent venues like npj Viruses and Nature Communications, the article engages diverse research types including articles and preprints. Although open access status is unknown, uptake is evidenced across virology and influenza-related concepts, highlighting its relevance for virus surveillance and antigenic drift studies.
This article, titled “Deep mutational scanning of H5 hemagglutinin to inform influenza virus surveillance,” was published on November 12, 2024, in PLoS Biology by a multidisciplinary team including researchers from Fred Hutch Cancer Center, University of Washington, University of Pennsylvania, Imperial College London, and other institutions. The author group features notable contributors such as Bernadeta Dadonaite and Jesse D. Bloom, reflecting a broad institutional collaboration across US and UK research centers. The work is positioned at the intersection of biology and virology, addressing influenza virus mutations and surveillance.
The research is grounded in key scientific concepts, prominently biology (score 0.83), hemagglutinin (influenza) (0.78), and virology (0.73), indicating its focus on viral mutation and phenotype characterization. Other concepts such as influenza A virus, mutation, antigenic drift, and neutralization further contextualize the study within viral evolution and immune response research. This conceptual framework situates the work squarely in efforts to understand influenza virus antigenic changes and their implications for public health surveillance.
The article has accrued 58 citations, reflecting recognition within the scientific community. Its citing works span multiple forms, including 29 articles, 18 preprints, and 7 reviews, showing a mix of original research and synthesis. Top citing venues include npj Viruses (3), Proceedings of the National Academy of Sciences (2), Nature Communications (2), and Nature (2), highlighting engagement by leading journals. The dominant citing concepts include virology (21) and influenza A virus subtype H5N1 (19), with the United States contributing 35 citing works, pointing to significant uptake within key influenza research hubs.
Online mentions recorded via Crossref Event Data are limited, with just one newsfeed mention, suggesting modest yet visible public or media footprint shortly after publication. While the event data is sparse, this single newsfeed trace indicates some early communication beyond purely academic channels. Further evidence from a scite report shows 19 total citation statements, with no contradicting citations and one supporting statement, reinforcing a generally favorable scientific reception without controversial or disputing discourse detected so far.
The article’s open access status and a direct publisher landing page are not available, limiting immediate public accessibility assessment. The absence of a best open access full-text link suggests that reuse potential outside subscription or institutional access may be restricted at this time. This could impact the broader dissemination of its findings, particularly outside specialized academic circles or resource-rich institutions.
Considering the citation landscape comprising a substantial number of preprints (18) alongside articles and reviews, the uptake pattern suggests the article is contributing to ongoing, rapidly evolving influenza research dialogues. This distribution, coupled with numerous citing works in high-impact journals such as Nature Communications and PNAS, is consistent with a foundational role for informing subsequent studies on viral mutation and antigenic characterization. Qualitative follow-up via scite or bibliometric analyses could further elucidate the nature and influence of these citations over time.
Heuristic classification from citation composition / usage signals. Not based on full text.
| Year | Title | Venue | DOI |
|---|---|---|---|
| 2026 | Management of critical illness in an adolescent caused by highly pathogenic avian influenza A(H5N1) virus infection in British Columbia, Canada | The Lancet Infectious Diseases | 10.1016/s1473-3099(25)00773-x scite |
| 2026 | Functional and antigenic constraints on the Nipah virus fusion protein | Proceedings of the National Academy of Sciences | 10.1073/pnas.2529505123 scite |
| 2026 | Loss of α2,3-linked sialoside in the receptor-binding site of a H5N1 influenza hemagglutinin identified in a human patient | 10.64898/2026.01.19.700419 scite | |
| 2026 | Influenza hemagglutinin subtypes have different sequence constraints despite sharing extremely similar structures | 10.64898/2026.01.05.697808 scite | |
| 2025 | Nonviral protein cages as tools to decipher and combat viral threats | npj Viruses | 10.1038/s44298-025-00127-8 scite |
| 2025 | Impact of naturally occurring hemagglutinin substitutions on antigenicity and fitness of influenza A(H5N1) virus | npj Viruses | 10.1038/s44298-025-00154-5 scite |
| 2025 | Balancing stability and function: impact of the surface charge of SARS-CoV-2 Omicron spike protein | npj Viruses | 10.1038/s44298-025-00104-1 scite |
| 2025 | Inverted H1 hemagglutinin nanoparticle vaccines protect mice against challenges with human H1N1 and bovine H5N1 influenza viruses | npj Vaccines | 10.1038/s41541-025-01276-w scite |
| 2025 | Strategies and efforts in circumventing the emergence of antiviral resistance against conventional antivirals | npj Antimicrobials and Resistance | 10.1038/s44259-025-00125-z scite |
| 2025 | AbAgym: a well-curated dataset for the mutational analysis of antibody–antigen complexes | mAbs | 10.1080/19420862.2025.2592421 scite |
| 2025 | Development of avian influenza A(H5) virus datasets for Nextclade enables rapid and accurate clade assignment | Virus Evolution | 10.1093/ve/veaf058 scite |
| 2025 | Attachment and replication of clade 2.3.4.4b influenza A (H5N1) viruses in human respiratory epithelium: an in-vitro study | The Lancet Microbe | 10.1016/j.lanmic.2025.101230 scite |
| 2025 | Structure of a zoonotic H5N1 hemagglutinin reveals a receptor-binding site occupied by an auto-glycan | Structure | 10.1016/j.str.2025.01.001 scite |
| 2025 | Preclinical Evaluation of an mRNA Vaccine Developed from the First Human Isolate of Bovine H5N1 | SSRN Electronic Journal | 10.2139/ssrn.5353082 scite |
| 2025 | The Q226L mutation can convert a highly pathogenic H5 2.3.4.4e virus to bind human-type receptors | Proceedings of the National Academy of Sciences | 10.1073/pnas.2419800122 scite |
| 2025 | The sweet side of H5N1 influenza virus infection | PLoS Pathogens | 10.1371/journal.ppat.1012847 scite |
| 2025 | Multiplexed assays of variant effect for clinical variant interpretation | Nature Reviews Genetics | 10.1038/s41576-025-00870-x scite |
| 2025 | Cross-neutralizing and potent human monoclonal antibodies against historical and emerging H5Nx influenza viruses | Nature Microbiology | 10.1038/s41564-025-02137-x scite |
| 2025 | Pleiotropic mutational effects on function and stability constrain the antigenic evolution of influenza haemagglutinin | Nature Ecology & Evolution | 10.1038/s41559-025-02895-1 scite |
| 2025 | Learning a viral protein’s vocabulary | Nature Ecology & Evolution | 10.1038/s41559-025-02928-9 scite |
| 2025 | Host switching mutations in H5N1 influenza hemagglutinin suppress site-specific activation dynamics | Nature Communications | 10.1038/s41467-025-66926-y scite |
| 2025 | Lengthy delays in H5N1 genome submissions to GISAID | Nature Biotechnology | 10.1038/s41587-025-02636-6 scite |
| 2025 | Receptor-binding specificity of a bovine influenza A virus | Nature | 10.1038/s41586-025-08822-5 scite |
| 2025 | Hemagglutinin-displaying influenza nanovaccines: progress and promise | Nanomedicine | 10.1080/17435889.2025.2598329 scite |
| 2025 | Decoding non-human mammalian adaptive signatures of 2.3.4.4b H5N1 to assess its human adaptive potential | Microbiology Spectrum | 10.1128/spectrum.00948-25 scite |
| 2025 | Experimental and computational approaches to adaptive viral evolution: Linking molecular variation to phenotypic outcomes | Journal of Microbiological Methods | 10.1016/j.mimet.2025.107379 scite |
| 2025 | H5N1 2.3.4.4b: a review of mammalian adaptations and risk of pandemic emergence | Journal of General Virology | 10.1099/jgv.0.002109 scite |
| 2025 | Mutations in the influenza virus, primarily H5N1, enhance the virus’s virulence, favor receptor interaction, and increase drug resistance | International Journal of Surgery | 10.1097/js9.0000000000002403 scite |
| 2025 | Immunological and virological questions for H5N1 pandemic emergence | ImmunoHorizons | 10.1093/immhor/vlaf062 scite |
| 2025 | Risk assessment of 2024 cattle H5N1 using age-stratified serosurveillance data | Emerging Microbes & Infections | 10.1080/22221751.2025.2497304 scite |
| 2025 | Large-scale computational modelling of H5 influenza variants against HA1-neutralising antibodies | EBioMedicine | 10.1016/j.ebiom.2025.105632 scite |
| 2025 | A review of the animal influenza viruses and their impact on human health | Discover Public Health | 10.1186/s12982-025-00679-3 scite |
| 2025 | Deep mutational scanning of rabies glycoprotein defines mutational constraint and antibody-escape mutations | Cell Host & Microbe | 10.1016/j.chom.2025.04.018 scite |
| 2025 | Insights from deep mutational scanning in the context of an emerging pathogen | Biochemical Society Transactions | 10.1042/bst20253033 scite |
| 2025 | The Q226L mutation can convert a highly pathogenic H5 2.3.4.4e virus to bind human-type receptors | 10.1101/2025.01.10.632119 scite | |
| 2025 | Targeted tiled amplicon based protocol for sequencing the Hemagglutinin (HA) gene segment of seasonal influenza A and influenza B virus from wastewater at high depth of coverage | 10.1101/2025.10.15.25338105 scite | |
| 2025 | Susceptibility of bovine respiratory and mammary epithelial cells to avian and mammalian derived clade 2.3.4.4b H5N1 highly pathogenic avian influenza viruses | 10.1101/2025.01.09.632235 scite | |
| 2025 | Stabilization of H5 highly pathogenic avian influenza hemagglutinin improves vaccine-elicited neutralizing antibody responses | 10.1101/2025.07.30.667762 scite | |
| 2025 | Seasonal influenza viruses show distinct adaptive dynamics during growth in chicken eggs | 10.1101/2025.06.12.659400 scite | |
| 2025 | Random mutagenesis of influenza hemagglutinin identifies new sites which modulate its acid-stability and cleavability | 10.1101/2025.07.25.666873 scite | |
| 2025 | Pleiotropic mutational effects on function and stability constrain the antigenic evolution of influenza hemagglutinin | 10.1101/2025.05.24.655919 scite | |
| 2025 | Mutational spectra reveal influenza virus transmission routes and adaptation | 10.1101/2025.11.26.690773 scite | |
| 2025 | Host Switching Mutations in H5N1 Influenza Hemagglutinin Suppress Site-specific Activation Dynamics | 10.1101/2025.10.06.680362 scite | |
| 2025 | H5N1 Influenza A is now promiscuous in host range and has improved replication in mammals | 10.1101/2025.03.15.641219 scite | |
| 2025 | Functional and antigenic constraints on the Nipah virus fusion protein | 10.1101/2025.10.15.682664 scite | |
| 2025 | Evaluating variant effect prediction across viruses | 10.1101/2025.08.04.668549 scite | |
| 2025 | A Fine-tuned ProtGPT2 (transformer model) for Predicting more Virulent SARS-CoV-2 variants and understanding its virulence by biophysical methods | 10.1101/2025.01.13.632691 scite | |
| 2024 | A single mutation in bovine influenza H5N1 hemagglutinin switches specificity to human receptors | Science | 10.1126/science.adt0180 scite |
| 2024 | PLOS Biology and the life sciences in 2024 | PLoS Biology | 10.1371/journal.pbio.3002985 scite |
| 2024 | Critical Illness in an Adolescent with Influenza A(H5N1) Virus Infection | New England Journal of Medicine | 10.1056/nejmc2415890 scite |
| 2024 | A single mutation in dairy cow-associated H5N1 viruses increases receptor binding breadth | Nature Communications | 10.1038/s41467-024-54934-3 scite |
| 2024 | The global H5N1 influenza panzootic in mammals | Nature | 10.1038/s41586-024-08054-z scite |
| 2024 | Analysis of the Monophyletic Lineage of Avian Influenza H5N1 Which Circulated in Venezuelan Birds During the 2022–2023 Outbreak | Microorganisms | 10.3390/microorganisms12122519 scite |
| 2024 | Predictive Modeling of Respiratory Virus Evolution: Current Capabilities and Limitations | Mathematical Biology and Bioinformatics | 10.17537/2024.19.579 scite |
| 2024 | Structure of a zoonotic H5N1 hemagglutinin reveals a receptor-binding site occupied by an auto-glycan | 10.1101/2024.12.06.626699 scite | |
| 2024 | Risk assessment of 2024 cattle H5N1 using age-stratified serosurveillance data | 10.1101/2024.12.23.24319580 scite | |
| 2024 | Receptor Binding Specificity of a Bovine A(H5N1) Influenza Virus | 10.1101/2024.07.30.605893 scite | |
| 2024 | Deep mutational scanning of rabies glycoprotein defines mutational constraint and antibody-escape mutations | 10.1101/2024.12.17.628970 scite |